PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_479454g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 179aa    MW: 21108.2 Da    PI: 5.4987
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_479454g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.21.1e-0671117454
                     HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     +    Er RR+r++    eL +llP  +     +Kl+     e+A++YI +L
  MA_479454g0010  71 NQILEERLRRKRMKCLCTELESLLPAtP-----EKLDRCGLFEEAINYIGML 117
                     55567*********************55.....9***************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.68E-565119No hitNo description
Gene3DG3DSA:4.10.280.103.7E-1066131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-1166128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.82467117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-469117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-473123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MASDCLLSCS YPASEKEYSN IPQCDRQVDC RVSASRKRPS EVDSDLQDCN DLQEIVWRDV  60
DQMTKVSRKE NQILEERLRR KRMKCLCTEL ESLLPATPEK LDRCGLFEEA INYIGMLEES  120
MHQLKRKRDN LLAIQTGKTA NENIEIKVTV KFYDREAIID ITSQRRPRYM WRILEELEK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NYK84e-93A9NYK8_PICSI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.17e-07bHLH family protein